STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94402.1Hypothetical protein. (1130 aa)    
Predicted Functional Partners:
EDP94401.1
DNA methylase N-4/N-6 domain protein; COG2189 Adenine specific DNA methylase Mod.
 
   
 0.949
EDP94400.1
COG0210 Superfamily I DNA and RNA helicases.
 
     0.935
EDP94662.1
Hypothetical protein.
 
  
 0.761
EDP95125.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.728
EDP95126.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.666
EDP96512.1
Hypothetical protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
  
     0.572
EDP94650.1
Hypothetical protein; COG0286 Type I restriction-modification system methyltransferase subunit.
  
     0.565
EDP94714.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.563
EDP96510.1
Putative methylase/helicase.
  
     0.547
EDP97495.1
DNA methylase N-4/N-6 domain protein; COG2189 Adenine specific DNA methylase Mod.
 
  
 0.531
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.