STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94411.1Peptidase S8 and S53, subtilisin, kexin, sedolisin; COG1404 Subtilisin-like serine proteases. (394 aa)    
Predicted Functional Partners:
EDP94390.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
     0.759
EDP97043.1
Serine protease / subtilase peptidase.
  
     0.743
EDP96403.1
Serine protease / subtilase peptidase.
  
     0.727
EDP94412.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.698
EDP94410.1
Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
       0.414
EDP96364.1
Hypothetical protein.
   
   0.413
EDP96072.1
Hypothetical protein.
   
   0.413
EDP96073.1
Hypothetical protein; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
   
   0.413
EDP97803.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
   
   0.413
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.412
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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