STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95825.1COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (515 aa)    
Predicted Functional Partners:
EDP95497.1
COG0642 Signal transduction histidine kinase.
 
 0.866
EDP98467.1
COG0642 Signal transduction histidine kinase.
  
 
 0.801
EDP95690.1
Hypothetical protein; COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
 
 
 0.788
secA
Preprotein translocase ATPase subunit; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
     0.780
EDP97682.1
COG3047 Outer membrane protein W.
  
     0.767
EDP95633.1
Hybrid sensory kinase; COG0642 Signal transduction histidine kinase.
  
0.759
EDP98159.1
COG0642 Signal transduction histidine kinase.
   
 0.717
EDP97681.1
COG1843 Flagellar hook capping protein.
 
  
 0.708
EDP95711.1
Serine/threonine protein kinase.
    
 0.658
EDP94627.1
Sensor histidine kinase.
 
 
 0.645
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.