STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94509.1LPS biosynthesis protein; COG0438 Glycosyltransferase. (371 aa)    
Predicted Functional Partners:
EDP94510.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.952
EDP94513.1
Translation-associated GTPase; COG0438 Glycosyltransferase.
 
     0.948
EDP94512.1
COG0438 Glycosyltransferase.
 
     0.946
EDP94507.1
Glycosyl transferase, group 1.
     0.940
EDP94260.1
COG1083 CMP-N-acetylneuraminic acid synthetase.
 
    0.792
EDP94508.1
Hypothetical protein; COG0438 Glycosyltransferase.
       0.782
EDP94511.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
       0.773
EDP94514.1
Hypothetical protein; COG2255 Holliday junction resolvasome, helicase subunit.
       0.773
EDP94501.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
  
     0.770
EDP94274.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.770
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.