STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95150.1Hypothetical protein; COG5309 Exo-beta-1,3-glucanase. (416 aa)    
Predicted Functional Partners:
EDP95149.1
Glycosyl hydrolase, family 30; COG5520 O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
     0.921
EDP95148.1
Putative glycosyl hydrolase; COG2211 Na+/melibiose symporter and related transporters.
 
     0.919
EDP95151.1
Hypothetical protein; COG0174 Glutamine synthetase.
 
     0.918
EDP95147.1
Putative glycosyl hydrolase; COG5309 Exo-beta-1,3-glucanase.
 
     0.883
EDP95146.1
Putative glycosyl hydrolase; COG5309 Exo-beta-1,3-glucanase.
 
     0.881
EDP95154.1
Hypothetical protein.
 
     0.876
EDP95153.1
COG5492 Bacterial surface proteins containing Ig-like domains.
 
     0.856
EDP95152.1
Glycosyl hydrolase, family 15; COG2273 Beta-glucanase/Beta-glucan synthetase.
     0.744
EDP95145.1
Hypothetical protein; COG0296 1,4-alpha-glucan branching enzyme.
 
     0.684
EDP95897.1
Hypothetical protein.
  
     0.513
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.