STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95935.1Hypothetical protein; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (459 aa)    
Predicted Functional Partners:
EDP94601.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.936
EDP96667.1
COG0067 Glutamate synthase domain 1.
  
 
 0.828
fmt-2
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
      0.820
EDP94609.1
COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.780
EDP95934.1
COG2366 Protein related to penicillin acylase.
       0.773
EDP97426.1
Bifunctional protein: malate dehydrogenase; COG0281 Malic enzyme.
  
 
 0.738
EDP94600.1
Amino acid adenylation; COG0001 Glutamate-1-semialdehyde aminotransferase.
   
 
 0.701
EDP94610.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.697
EDP94334.1
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; COG3321 Polyketide synthase modules and related proteins.
  
 0.682
EDP94608.1
COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.682
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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