STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP96056.1Phospholipase/carboxylesterase family protein; COG0400 Predicted esterase. (217 aa)    
Predicted Functional Partners:
EDP96054.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
   
   0.814
EDP96053.1
Hypothetical protein; COG0039 Malate/lactate dehydrogenases.
       0.797
EDP96055.1
COG4818 Predicted membrane protein.
       0.756
EDP96057.1
Hypothetical protein.
       0.536
EDP94530.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
   
 0.464
EDP98360.1
Hydrolase of the alpha/beta superfamily protein.
  
    0.460
EDP95000.1
Hypothetical protein.
  
  
  0.457
EDP96052.1
Ribonuclease H-related protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
       0.430
EDP98389.1
COG1577 Mevalonate kinase.
  
     0.418
EDP98550.1
Hypothetical protein; COG1100 GTPase SAR1 and related small G proteins.
   
 
  0.417
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.