STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94884.1Hypothetical protein; COG0457 FOG: TPR repeat. (241 aa)    
Predicted Functional Partners:
EDP94881.1
Hypothetical protein.
       0.791
EDP94883.1
Hypothetical protein.
       0.791
EDP94886.1
Hypothetical protein; COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component.
       0.791
EDP94885.1
COG0714 MoxR-like ATPases.
       0.789
EDP94882.1
Hypothetical protein.
       0.773
EDP94887.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
       0.456
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.