STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94911.1Haemagluttinin family protein; COG5295 Autotransporter adhesin. (922 aa)    
Predicted Functional Partners:
guaA-2
GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.628
EDP95441.1
Putative competence-damage inducible; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
  0.564
EDP94907.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.561
EDP94908.1
Putative oxidoreductase (putative secreted protein); COG0002 Acetylglutamate semialdehyde dehydrogenase.
       0.561
EDP94909.1
Hypothetical protein.
       0.561
EDP98150.1
COG5651 PPE-repeat proteins.
  
     0.519
EDP94801.1
Tetratricopeptide TPR_2; COG0457 FOG: TPR repeat.
  
     0.518
EDP94272.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
  
  0.503
EDP97206.1
Outer membrane protein, peptidoglycan-associated lipoprotein.
 
 
  0.490
EDP98337.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
   0.489
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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