STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95228.1MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (119 aa)    
Predicted Functional Partners:
EDP98542.1
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
 
 0.837
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.801
EDP94486.1
Peptidyl-prolyl cis-trans isomerase.
    
   0.736
EDP94394.1
Peptidyl-prolyl cis-trans isomerase.
    
   0.736
EDP97537.1
MORN motif precursor; COG3209 Rhs family protein.
  
 
 
 0.657
EDP94626.1
Transcriptional regulator; COG0784 FOG: CheY-like receiver.
    
 0.566
EDP94998.1
Peptidylprolyl isomerase A (peptidyl-prolyl cis-trans isomerase); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.558
EDP95554.1
Ankyrin.
  
 0.544
EDP95227.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.537
EDP97426.1
Bifunctional protein: malate dehydrogenase; COG0281 Malic enzyme.
  
 
 0.530
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.