STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94088.1Secreted enzyme, contains two amidohydrolase related domains; COG1228 Imidazolonepropionase and related amidohydrolases. (183 aa)    
Predicted Functional Partners:
EDP94515.1
Secreted enzyme, contains two amidohydrolase related domains; COG1228 Imidazolonepropionase and related amidohydrolases.
     0.987
EDP94516.1
Predicted amidohydrolase.
 
    
0.662
EDP95253.1
COG2986 Histidine ammonia-lyase.
  
  
 0.550
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
   
 
  0.511
EDP97606.1
Hypothetical protein.
   
 
  0.511
EDP94087.1
Hypothetical protein.
       0.497
EDP94398.1
3-deoxy-manno-octulosonate cytidylyltransferase; COG2195 Di- and tripeptidases.
       0.459
EDP94399.1
Hypothetical protein.
       0.456
EDP94481.1
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain; COG0541 Signal recognition particle GTPase.
  
     0.451
EDP95012.1
Putative transcriptional regulator (AraC/XylS family) protein.
  
     0.421
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.