STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95430.1Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative; COG4365 Uncharacterized protein conserved in bacteria. (833 aa)    
Predicted Functional Partners:
EDP95200.1
Hypothetical protein.
    
 0.668
EDP96273.1
COG1186 Protein chain release factor B.
  
     0.646
bshC
Hypothetical protein; Belongs to the BshC family.
       0.542
EDP98144.1
Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases.
  
     0.536
EDP95563.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.484
EDP95714.1
Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase.
  
  
  0.478
EDP94833.1
Hydrolase, CocE/NonD family protein; COG2936 Predicted acyl esterases.
 
     0.471
EDP97980.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.452
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.