Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP95434.1Hypothetical protein; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases. (446 aa)    
Predicted Functional Partners:
EDP94255.1
Potassium transporter (Trk family) protein; COG2072 Predicted flavoprotein involved in K+ transport.
  
     0.595
EDP95433.1
Amidase.
       0.532
EDP95372.1
CUB domain-containing protein.
  
     0.523
EDP95435.1
COG2963 Transposase and inactivated derivatives.
       0.509
EDP95436.1
Integrase, catalytic region; COG2801 Transposase and inactivated derivatives.
       0.509
EDP97879.1
Hypothetical protein.
  
     0.469
EDP95142.1
YurI; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.447
EDP97640.1
CHU large protein; COG5295 Autotransporter adhesin.
  
     0.409
EDP96182.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.401
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.