STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95512.1COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (454 aa)    
Predicted Functional Partners:
EDP95513.1
Response regulator receiver domain protein (CheY-like).
 
 0.969
EDP95497.1
COG0642 Signal transduction histidine kinase.
  
 0.848
EDP97326.1
RNA polymerase, sigma-54 factor; COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
 
  
 0.831
EDP95633.1
Hybrid sensory kinase; COG0642 Signal transduction histidine kinase.
  
 0.759
EDP98159.1
COG0642 Signal transduction histidine kinase.
   
 0.717
EDP97089.1
Two-component sensor histidine kinase (sensor protein AtoS); COG0642 Signal transduction histidine kinase.
 0.714
EDP95511.1
ABC transporter permease; COG0845 Membrane-fusion protein.
 
     0.700
EDP95711.1
Serine/threonine protein kinase.
    
 0.658
EDP96230.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
 0.617
EDP94627.1
Sensor histidine kinase.
   
 0.592
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.