STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP98014.1COG3039 Transposase and inactivated derivatives, IS5 family. (297 aa)    
Predicted Functional Partners:
EDP98015.1
Low temperature requirement A; COG4292 Predicted membrane protein.
       0.608
EDP98016.1
Phenylacetic acid degradation-related protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
       0.608
EDP98017.1
Hypothetical protein; COG0450 Peroxiredoxin.
       0.608
EDP98018.1
Hypothetical protein; COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).
       0.603
EDP97683.1
COG3039 Transposase and inactivated derivatives, IS5 family.
  
     0.549
EDP98013.1
Low temperature requirement A; COG0395 ABC-type sugar transport system, permease component.
       0.539
EDP98019.1
Transcriptional regulator, MarR family protein.
       0.434
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.