STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP98200.1Deoxyguanosine kinase/deoxyadenosine kinase subunit; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. (377 aa)    
Predicted Functional Partners:
EDP94589.1
COG0294 Dihydropteroate synthase and related enzymes.
 
 0.999
EDP96823.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
 
 0.991
EDP96023.1
Ferredoxin 2 with 4Fe-4S binding domain.
   
 0.952
ribB
Bifunctional protein: GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
 
  
 0.921
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
     
 0.879
EDP97678.1
COG0285 Folylpolyglutamate synthase.
 
 
 0.871
EDP95715.1
COG0813 Purine-nucleoside phosphorylase.
  
 
  0.870
EDP95709.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
  0.822
EDP95232.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
  0.822
EDP97732.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
  0.822
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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