STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP98470.1Hypothetical protein; COG0782 Transcription elongation factor. (147 aa)    
Predicted Functional Partners:
EDP98373.1
NADH oxidase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.892
EDP94872.1
Oxidoreductase, FAD-binding, putative.
  
 
 0.849
EDP96667.1
COG0067 Glutamate synthase domain 1.
   
 
 0.774
EDP96984.1
TPR domain protein.
  
    0.758
EDP96978.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.756
EDP97579.1
Hypothetical protein.
  
 
 0.756
EDP98534.1
Hypothetical protein; COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains.
  
     0.746
EDP94889.1
Hypothetical protein.
  
     0.736
EDP96077.1
Hypothetical protein.
  
     0.733
EDP96351.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
     
 0.730
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.