STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP96684.1Hypothetical protein; COG0016 Phenylalanyl-tRNA synthetase alpha subunit. (118 aa)    
Predicted Functional Partners:
EDP97219.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.764
EDP98049.1
Hypothetical protein.
  
     0.753
EDP95921.1
Hypothetical protein.
  
     0.739
EDP96022.1
Hypothetical protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
     0.723
EDP96024.1
Peptidase T; COG1145 Ferredoxin.
  
     0.706
EDP95000.1
Hypothetical protein.
  
     0.703
EDP98412.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.693
EDP95066.1
Hypothetical protein; COG1193 Mismatch repair ATPase (MutS family).
  
     0.686
mazG
Nucleoside triphosphate pyrophosphohydrolase; Belongs to the ClpS family.
  
     0.671
pheS-2
Phenylalanine tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.671
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.