STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kptARNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (179 aa)    
Predicted Functional Partners:
EDP96711.1
Hypothetical protein; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
 
     0.935
EDP96710.1
COG1397 ADP-ribosylglycohydrolase.
 
   
 0.906
EDP96712.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.840
EDP96709.1
Hypothetical protein; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1.
     
 0.821
EDP96707.1
Protein T24A6.7; COG3236 Uncharacterized protein conserved in bacteria.
 
     0.818
EDP96708.1
Hypothetical protein; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
     
 0.775
EDP96716.1
COG1397 ADP-ribosylglycohydrolase.
 
   
 0.732
EDP96715.1
Silent information regulator protein Sir2; COG0846 NAD-dependent protein deacetylases, SIR2 family.
 
     0.710
EDP96706.1
Hypothetical protein; COG1397 ADP-ribosylglycohydrolase.
 
   
 0.707
EDP96714.1
Uncharacterized iron-regulated protein; COG1859 RNA:NAD 2'-phosphotransferase.
 
     0.687
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.