STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP96841.1Outer membrane protein. (792 aa)    
Predicted Functional Partners:
EDP96842.1
Hypothetical protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.946
EDP96075.1
Hypothetical protein.
  
     0.600
EDP97740.1
Putative outer membrane protein, probably involved in nutrient binding; COG3340 Peptidase E.
  
    0.588
EDP95927.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
  
     0.576
EDP98196.1
COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.546
EDP97207.1
Hypothetical protein.
  
     0.518
EDP97677.1
COG0848 Biopolymer transport protein.
  
   0.502
EDP94798.1
Putative phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
  
     0.495
EDP95368.1
Hypothetical protein.
  
     0.489
EDP95699.1
Hypothetical protein; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
     0.483
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.