STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP96981.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (495 aa)    
Predicted Functional Partners:
EDP96982.1
Putative ATP-binding component of ABC transporter protein.
 
     0.945
EDP97316.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.635
EDP96205.1
Hypothetical protein.
  
     0.633
EDP96840.1
Outer membrane chaperone Skp (OmpH); COG2825 Outer membrane protein.
  
     0.591
EDP95002.1
Hypothetical protein; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.587
EDP95389.1
Hypothetical protein.
  
     0.548
EDP95280.1
Hypothetical protein; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
  
     0.530
EDP96702.1
Hypothetical protein.
  
     0.526
EDP97004.1
Hypothetical protein.
  
     0.524
EDP96193.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.497
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.