Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP97005.1Hypothetical protein; COG0457 FOG: TPR repeat. (230 aa)    
Predicted Functional Partners:
EDP94415.1
Gliding motility-related protein; COG0795 Predicted permeases.
  
 
 
 0.962
EDP97006.1
Possible membrane protein; possible peptidase, M23/M37 family.
       0.814
EDP97004.1
Hypothetical protein.
 
     0.760
EDP95623.1
Hypothetical protein; COG0575 CDP-diglyceride synthetase.
  
     0.703
argC
N-acetyl-gamma-glutamyl-phosphate reductase; COG2911 Uncharacterized protein conserved in bacteria.
  
     0.698
EDP95539.1
Hypothetical protein.
  
     0.672
EDP95103.1
Hypothetical protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
  
     0.666
EDP95280.1
Hypothetical protein; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
  
     0.659
EDP97316.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.643
EDP94888.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.638
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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