STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97237.1Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (133 aa)    
Predicted Functional Partners:
EDP94262.1
Intervening sequence, 23S rRNA; COG0381 UDP-N-acetylglucosamine 2-epimerase.
  
     0.767
EDP97907.1
23S rRNA gene intervening sequence Orf; COG0541 Signal recognition particle GTPase.
  
     0.678
EDP97236.1
Iron-regulated ABC transporter, membrane-spanning permease.
       0.668
EDP97238.1
Scaffold protein for iron-sulphur cluster assembly; Belongs to the HesB/IscA family.
       0.645
EDP97235.1
Hypothetical protein; COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.
       0.622
EDP94642.1
Hypothetical protein.
   
  0.607
EDP94152.1
Hypothetical protein.
   
  0.607
EDP97234.1
Iron-regulated ABC transporter, ATP-binding protein; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
       0.552
EDP97233.1
Iron-regulated ABC transporter, membrane-spanning permease; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.548
EDP94107.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
   
  0.481
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.