STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97244.1COG2323 Predicted membrane protein. (252 aa)    
Predicted Functional Partners:
EDP97242.1
COG1858 Cytochrome c peroxidase.
 
     0.845
EDP95469.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
     0.793
EDP95468.1
COG1858 Cytochrome c peroxidase.
 
     0.781
EDP97245.1
PKD; COG2931 RTX toxins and related Ca2+-binding proteins.
       0.779
EDP97246.1
Regulatory P domain of the subtilisin-like proprotein convertases and other protease.
       0.773
EDP97247.1
Regulatory P domain of the subtilisin-like proprotein convertases and other protease.
       0.674
EDP95356.1
Hypothetical methylamine utilization protein.
 
     0.610
EDP97243.1
Hypothetical protein.
       0.510
EDP94315.1
Poly(beta-D-mannuronate) lyase.
  
     0.506
thiL
Putative thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.483
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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