STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97272.1COG0739 Membrane proteins related to metalloendopeptidases. (1120 aa)    
Predicted Functional Partners:
EDP95396.1
Hypothetical protein; Belongs to the peptidase S8 family.
  
 
   0.551
EDP95615.1
Hypothetical protein.
  
   0.534
EDP96079.1
Hypothetical protein; COG2317 Zn-dependent carboxypeptidase.
  
     0.527
EDP97270.1
Gamma-glutamyl carboxylase-like protein; COG0172 Seryl-tRNA synthetase.
       0.482
EDP97271.1
Bifunctional protein: riboflavin kinase; COG0196 FAD synthase; Belongs to the ribF family.
       0.482
EDP94888.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.455
EDP98059.1
Hypothetical protein; COG0142 Geranylgeranyl pyrophosphate synthase.
  
     0.424
EDP98125.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
 
   0.423
EDP94416.1
Cell division protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
   0.422
EDP94708.1
Hypothetical protein.
  
 
   0.420
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.