STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97341.1Acyltransferase family protein; COG3274 Uncharacterized protein conserved in bacteria. (321 aa)    
Predicted Functional Partners:
EDP97344.1
Radical SAM domain protein; COG0535 Predicted Fe-S oxidoreductases.
 
     0.851
EDP97343.1
Radical SAM domain protein; COG1032 Fe-S oxidoreductase.
 
     0.797
EDP97342.1
Methyltransferase small; COG2890 Methylase of polypeptide chain release factors; Belongs to the methyltransferase superfamily.
       0.773
EDP97340.1
COG0861 Membrane protein TerC, possibly involved in tellurium resistance.
       0.757
EDP97339.1
Hypothetical protein.
       0.741
EDP97347.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
 
     0.692
EDP94272.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
  
     0.598
EDP97345.1
Hypothetical protein.
 
     0.520
EDP97346.1
Hypothetical protein; COG3668 Plasmid stabilization system protein.
 
     0.520
EDP97521.1
Hypothetical protein.
   
    0.449
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.