STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97360.1COG0726 Predicted xylanase/chitin deacetylase. (328 aa)    
Predicted Functional Partners:
EDP97358.1
Methyltransferase, FkbM family protein; COG0500 SAM-dependent methyltransferases.
 
     0.813
EDP97359.1
Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.776
EDP97357.1
COG0438 Glycosyltransferase.
 
     0.746
EDP97361.1
COG0805 Sec-independent protein secretion pathway component TatC.
       0.613
EDP97862.1
COG0726 Predicted xylanase/chitin deacetylase.
  
     0.609
EDP97363.1
Fe-S protein, radical SAM family.
 
     0.478
EDP95123.1
Glycosyltransferase.
   
 
 0.469
EDP98173.1
B-glycosyltransferase-related protein, glycosyltransferase family 2 protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
   
 
 0.469
EDP98377.1
Glycosyl transferase, family 2.
   
 
 0.469
EDP95610.1
Putative transmembrane glycosyltransferase.
   
 
 0.469
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.