STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97680.1Possible gliding motility-related protein; possible serine kinase. (550 aa)    
Predicted Functional Partners:
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
      0.886
EDP98496.1
Possible gliding motility-related protein; COG2217 Cation transport ATPase.
  
   
 0.877
EDP97482.1
Hypothetical protein.
 
   
 0.870
EDP98050.1
Gliding motility protein; COG0218 Predicted GTPase.
  
   
 0.834
EDP95755.1
Possible gliding motility protein, possible ABC-related protein; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component.
  
   
 0.824
EDP97428.1
Gliding motility-related protein; COG0632 Holliday junction resolvasome, DNA-binding subunit.
  
   
 0.817
EDP96984.1
TPR domain protein.
  
   
 0.816
EDP97480.1
Gliding motility-related protein.
 
   
 0.811
EDP97029.1
Lipoprotein, putative; COG1774 Uncharacterized homolog of PSP1.
  
   
 0.798
apaG
ApaG; COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport.
  
     0.767
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.