STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97782.1POSSIBLE HYDROLASE. (507 aa)    
Predicted Functional Partners:
EDP95058.1
ThiJ/PfpI; COG0693 Putative intracellular protease/amidase.
 
 
    0.831
EDP96246.1
Hypothetical protein.
 
   0.828
EDP97479.1
Lipoprotein, putative.
 
   0.705
EDP94601.1
COG3321 Polyketide synthase modules and related proteins.
 
 
 0.655
EDP97680.1
Possible gliding motility-related protein; possible serine kinase.
 
   0.650
EDP95319.1
COG0448 ADP-glucose pyrophosphorylase.
   
    0.645
EDP97642.1
Hypothetical protein.
  
   0.588
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.576
EDP94342.1
Hypothetical protein; COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase.
   
   0.573
EDP94850.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
  
   0.567
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.