STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP97804.1Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein. (653 aa)    
Predicted Functional Partners:
EDP97803.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
 
    
0.751
EDP97802.1
Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
    0.596
EDP94830.1
Gamma-glutamyl carboxylase-like protein.
  
     0.483
pgk
Phosphoglycerate kinase; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
   0.463
EDP94255.1
Potassium transporter (Trk family) protein; COG2072 Predicted flavoprotein involved in K+ transport.
  
     0.447
EDP94601.1
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.442
EDP94416.1
Cell division protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
   0.422
EDP96182.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.405
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.