STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95560.1Putative phosphonate uptake related protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (141 aa)    
Predicted Functional Partners:
EDP98071.1
Ribosome-associated GTPase; COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.
    
  0.622
EDP96667.1
COG0067 Glutamate synthase domain 1.
   
 
 0.615
EDP95559.1
YitI; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
 
  0.553
EDP97654.1
Microtubule binding protein, putative; COG5022 Myosin heavy chain.
  
     0.481
EDP95644.1
Hypothetical protein; COG3663 G:T/U mismatch-specific DNA glycosylase.
  
     0.468
EDP96842.1
Hypothetical protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.458
EDP94601.1
COG3321 Polyketide synthase modules and related proteins.
  
  
 0.455
EDP97652.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
  
     0.452
EDP97653.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.452
EDP97647.1
Hypothetical protein.
  
     0.441
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.