STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95587.1Methyltransferase type 12; COG0500 SAM-dependent methyltransferases. (267 aa)    
Predicted Functional Partners:
EDP94797.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
 
   0.676
EDP97713.1
Glycine dehydrogenase (decarboxylating), glycine cleavage system P-protein; Belongs to the GcvP family.
   
 
  0.590
EDP98271.1
Hypothetical protein; COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease.
    
   0.559
EDP98272.1
Putative phage polynucleotide kinase.
    
   0.559
EDP95586.1
Hypothetical protein; COG3104 Dipeptide/tripeptide permease.
       0.536
EDP94601.1
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.436
kmo
Monooxygenase, FAD-binding protein; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 0.418
glyA-2
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
  0.409
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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