STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95672.1Hypothetical protein; COG1225 Peroxiredoxin. (72 aa)    
Predicted Functional Partners:
EDP95673.1
Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.703
EDP95767.1
Hypothetical protein; COG0534 Na+-driven multidrug efflux pump.
  
     0.700
EDP95671.1
Hypothetical protein.
       0.665
EDP96822.1
Hypothetical protein; COG1280 Putative threonine efflux protein.
  
     0.635
EDP95181.1
Sensory box histidine kinase/response regulator.
   
   0.593
EDP94923.1
COG0642 Signal transduction histidine kinase.
   
   0.593
EDP98551.1
Sensory box histidine kinase/response regulator.
   
   0.593
EDP95599.1
COG0642 Signal transduction histidine kinase.
   
   0.593
EDP95633.1
Hybrid sensory kinase; COG0642 Signal transduction histidine kinase.
   
   0.593
EDP95634.1
Phosphatidylserine decarboxylase; COG0642 Signal transduction histidine kinase.
   
   0.593
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.