STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB82979.1Conserved hypothetical protein. (119 aa)    
Predicted Functional Partners:
EEB84945.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.636
EEB83323.1
[O] COG0435 Predicted glutathione S-transferase.
       0.612
EEB84183.1
Conserved hypothetical protein.
  
     0.604
EEB84613.1
Conserved hypothetical protein.
  
     0.572
EEB84219.1
Thioesterase family protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
  
     0.557
EEB84968.1
Conserved hypothetical protein.
  
     0.511
EEB86386.1
Phosphoglycerate mutase family protein; [G] COG0406 Fructose-2,6-bisphosphatase.
  
     0.480
EEB86457.1
Conserved hypothetical protein.
  
     0.461
EEB86445.1
Conserved hypothetical protein; [S] COG5462 Predicted secreted (periplasmic) protein.
  
     0.454
EEB86278.1
Conserved hypothetical protein.
  
     0.430
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.