STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB82982.1Metallo-beta-lactamase family protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases. (349 aa)    
Predicted Functional Partners:
EEB86277.1
Conserved hypothetical protein.
       0.844
EEB85798.1
Acetyltransferase; [E] COG1045 Serine acetyltransferase.
   
    0.833
EEB83008.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
    0.824
EEB85624.1
Sua5/YciO/YrdC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.703
EEB85213.1
Lipoprotein, putative.
       0.627
EEB85886.1
[IQ] COG0236 Acyl carrier protein.
  
 
   0.539
EEB83492.1
Bacterial aa3 type cytochrome c oxidase subunit IV superfamily.
       0.519
EEB86344.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
    
  0.453
EEB82484.1
Conserved hypothetical protein TIGR01244; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
  0.453
EEB84114.1
Sarcosine oxidase, alpha subunit family; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 
  0.438
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.