rpsU_2 protein (Roseobacter sp. GAI101) - STRING interaction network

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rpsU_2

[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (68 aa)

Predicted Functional Partners:

rpsP

0.991

rpsT

0.991

rpsO

0.990

rpsF

0.990

rpsL

0.988

rpsJ

0.988

rpsB

0.988

rpsI

0.986

rpsR

0.986

rpoC

0.985

Your Current Organism:

Roseobacter sp. GAI101

NCBI taxonomy Id: 391589
Other names: R. sp. GAI101

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpoC	rpsB	RGAI101_2357	RGAI101_885	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rpoC	rpsF	RGAI101_2357	RGAI101_2531	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.997
rpoC	rpsI	RGAI101_2357	RGAI101_1048	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	[J] COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.997
rpoC	rpsJ	RGAI101_2357	RGAI101_2563	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
rpoC	rpsL	RGAI101_2357	RGAI101_185	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.999
rpoC	rpsO	RGAI101_2357	RGAI101_1159	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994
rpoC	rpsP	RGAI101_2357	RGAI101_2100	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rpoC	rpsR	RGAI101_2357	RGAI101_1129	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rpoC	rpsT	RGAI101_2357	RGAI101_2928	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993
rpoC	rpsU_2	RGAI101_2357	RGAI101_1646	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.985
rpsB	rpoC	RGAI101_885	RGAI101_2357	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpsB	rpsF	RGAI101_885	RGAI101_2531	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.998
rpsB	rpsI	RGAI101_885	RGAI101_1048	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	[J] COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rpsB	rpsJ	RGAI101_885	RGAI101_2563	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
rpsB	rpsL	RGAI101_885	RGAI101_185	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.999
rpsB	rpsO	RGAI101_885	RGAI101_1159	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.998
rpsB	rpsP	RGAI101_885	RGAI101_2100	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rpsB	rpsR	RGAI101_885	RGAI101_1129	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.999
rpsB	rpsT	RGAI101_885	RGAI101_2928	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.996
rpsB	rpsU_2	RGAI101_885	RGAI101_1646	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.988