node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEB83599.1 | rpoH_1 | RGAI101_748 | RGAI101_1679 | GcrA cell cycle regulator; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. | 0.878 |
EEB84176.1 | rpoA | RGAI101_1326 | RGAI101_2939 | [K] COG1329 Transcriptional regulators, similar to M. xanthus CarD. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
EEB84176.1 | rpoB_1 | RGAI101_1326 | RGAI101_410 | [K] COG1329 Transcriptional regulators, similar to M. xanthus CarD. | DNA-directed RNA polymerase, beta subunit; [L] COG1943 Transposase and inactivated derivatives. | 0.958 |
EEB84176.1 | rpoB_2 | RGAI101_1326 | RGAI101_1753 | [K] COG1329 Transcriptional regulators, similar to M. xanthus CarD. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.952 |
EEB84176.1 | rpoC | RGAI101_1326 | RGAI101_2357 | [K] COG1329 Transcriptional regulators, similar to M. xanthus CarD. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
EEB84176.1 | rpoH_1 | RGAI101_1326 | RGAI101_1679 | [K] COG1329 Transcriptional regulators, similar to M. xanthus CarD. | [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. | 0.941 |
EEB84176.1 | rpoZ | RGAI101_1326 | RGAI101_1901 | [K] COG1329 Transcriptional regulators, similar to M. xanthus CarD. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.969 |
ada | rpoA | RGAI101_1936 | RGAI101_2939 | ADA regulatory protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.713 |
ada | rpoH_1 | RGAI101_1936 | RGAI101_1679 | ADA regulatory protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. | 0.911 |
dnaJ | dnaK | RGAI101_2717 | RGAI101_323 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.999 |
dnaJ | rpoC | RGAI101_2717 | RGAI101_2357 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.948 |
dnaJ | rpoH_1 | RGAI101_2717 | RGAI101_1679 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. | 0.914 |
dnaK | dnaJ | RGAI101_323 | RGAI101_2717 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.999 |
dnaK | rpoA | RGAI101_323 | RGAI101_2939 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.584 |
dnaK | rpoB_1 | RGAI101_323 | RGAI101_410 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA-directed RNA polymerase, beta subunit; [L] COG1943 Transposase and inactivated derivatives. | 0.470 |
dnaK | rpoB_2 | RGAI101_323 | RGAI101_1753 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.470 |
dnaK | rpoC | RGAI101_323 | RGAI101_2357 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.525 |
dnaK | rpoH_1 | RGAI101_323 | RGAI101_1679 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. | 0.910 |
rpoA | EEB84176.1 | RGAI101_2939 | RGAI101_1326 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | [K] COG1329 Transcriptional regulators, similar to M. xanthus CarD. | 0.977 |
rpoA | ada | RGAI101_2939 | RGAI101_1936 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | ADA regulatory protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.713 |