STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB84843.1Tungstate ABC transporter, permease protein; [O] COG0555 ABC-type sulfate transport system, permease component. (234 aa)    
Predicted Functional Partners:
EEB83820.1
Tungstate ABC transporter, tungstate-binding protein; [H] COG2998 ABC-type tungstate transport system, permease component.
 
  
 0.992
EEB84851.1
Ferric cations import ATP-binding protein FbpC 1; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
  
  0.975
EEB83437.1
Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.812
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.798
EEB84643.1
[C] COG2864 Cytochrome b subunit of formate dehydrogenase.
 
     0.772
EEB83451.1
4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin.
 
   
 0.762
EEB85693.1
Chaperone, TorD family, putative; [R] COG3381 Uncharacterized component of anaerobic dehydrogenases.
 
    0.718
fdhA
Formate dehydrogenase, alpha subunit; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.713
EEB86410.1
Iron-sulfur cluster-binding protein; [C] COG1145 Ferredoxin.
 
     0.685
moeA
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.675
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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