Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB84850.1Transcriptional regulatory protein; [K] COG0583 Transcriptional regulator. (103 aa)    
Predicted Functional Partners:
EEB83666.1
Transcriptional regulatory protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
     0.965
EEB84513.1
1-deoxy-D-xylulose-5-phosphate synthase; [G] COG0021 Transketolase.
  
     0.746
EEB86160.1
Transketolase; [C] COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component.
  
     0.743
EEB84342.1
3-oxoacyl-(acyl-carrier-protein) reductase; [P] COG0288 Carbonic anhydrase.
  
     0.669
EEB86313.1
Trap dicarboxylate transporter, dctp subunit; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
     0.554
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.416
EEB83892.1
Hypothetical protein.
       0.402
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.