Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB84851.1Ferric cations import ATP-binding protein FbpC 1; [E] COG1126 ABC-type polar amino acid transport system, ATPase component. (238 aa)    
Predicted Functional Partners:
EEB84843.1
Tungstate ABC transporter, permease protein; [O] COG0555 ABC-type sulfate transport system, permease component.
  
  0.975
EEB83820.1
Tungstate ABC transporter, tungstate-binding protein; [H] COG2998 ABC-type tungstate transport system, permease component.
 
  
  0.968
EEB84256.1
[G] COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
  
 0.864
EEB85927.1
[G] COG1175 ABC-type sugar transport systems, permease components.
  
 0.864
EEB83322.1
[G] COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
  
 0.864
EEB83453.1
[G] COG1175 ABC-type sugar transport systems, permease components.
  
 0.864
EEB84790.1
ABC transporter, inner membrane subunit; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
     
  0.863
EEB85412.1
ABC sugar (glycerol) transporter, periplasmic binding protein; [G] COG1653 ABC-type sugar transport system, periplasmic component.
  
 0.855
EEB86283.1
[G] COG1653 ABC-type sugar transport system, periplasmic component.
  
 0.855
EEB83683.1
Extracellular solute-binding protein, family 1; [G] COG1653 ABC-type sugar transport system, periplasmic component.
  
 0.855
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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