Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB84852.1[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (148 aa)    
Predicted Functional Partners:
EEB85840.1
Peptidase M22, glycoprotease; [C] COG0778 Nitroreductase.
  
 
 0.887
EEB84948.1
NifU domain protein; [O] COG0694 Thioredoxin-like proteins and domains.
       0.718
EEB83987.1
Basic membrane lipoprotein; [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
       0.685
EEB83704.1
Sugar ABC transporter, permease protein; [G] COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.679
uca
Urea carboxylase; [I] COG0511 Biotin carboxyl carrier protein.
   
  0.658
EEB84561.1
[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.617
EEB85359.1
Sugar ABC transporter, ATP-binding protein; [R] COG3845 ABC-type uncharacterized transport systems, ATPase components.
       0.571
EEB86316.1
Sugar ABC transporter, permease protein; [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
       0.571
EEB84027.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.527
EEB85569.1
Membrane protein; [R] COG0730 Predicted permeases.
       0.527
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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