Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB84853.1[I] COG1960 Acyl-CoA dehydrogenases; overlaps another CDS with the same product name. (401 aa)    
Predicted Functional Partners:
EEB84445.1
Peroxisomal bifunctional enzyme; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.966
EEB82925.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
     0.936
EEB83058.1
Conserved domain protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.935
EEB85092.1
enoyl-CoA hydratase; [H] COG0447 Dihydroxynaphthoic acid synthase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.899
EEB86184.1
3-hydroxyacyl-CoA dehydrogenase, NAD-binding; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.884
EEB82949.1
Peroxisomal bifunctional enzyme; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.884
EEB85454.1
[I] COG1960 Acyl-CoA dehydrogenases; overlaps another CDS with the same product name.
    
0.856
fadD
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
  0.840
EEB85087.1
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.833
EEB84591.1
Transcriptional regulator, IclR family; [K] COG1414 Transcriptional regulator.
 
  
  0.754
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.