Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEB83201.1 | EEB83560.1 | RGAI101_348 | RGAI101_709 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | 0.908 |
| EEB83201.1 | EEB85087.1 | RGAI101_348 | RGAI101_2237 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.594 |
| EEB83201.1 | EEB85208.1 | RGAI101_348 | RGAI101_2359 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | MaoC family protein; [I] COG2030 Acyl dehydratase. | 0.848 |
| EEB83201.1 | ccrA | RGAI101_348 | RGAI101_1957 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.922 |
| EEB83201.1 | citE | RGAI101_348 | RGAI101_3576 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | [G] COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.695 |
| EEB83201.1 | ibd | RGAI101_348 | RGAI101_1991 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | [I] COG1960 Acyl-CoA dehydrogenases. | 0.886 |
| EEB83201.1 | mclA | RGAI101_348 | RGAI101_1804 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | [G] COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.717 |
| EEB83201.1 | sucC | RGAI101_348 | RGAI101_3113 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.853 |
| EEB83201.1 | sucD | RGAI101_348 | RGAI101_1546 | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | succinyl-CoA synthase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.860 |
| EEB83560.1 | EEB83201.1 | RGAI101_709 | RGAI101_348 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | 0.908 |
| EEB83560.1 | EEB85087.1 | RGAI101_709 | RGAI101_2237 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase. | 0.899 |
| EEB83560.1 | EEB85208.1 | RGAI101_709 | RGAI101_2359 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | MaoC family protein; [I] COG2030 Acyl dehydratase. | 0.633 |
| EEB83560.1 | ccrA | RGAI101_709 | RGAI101_1957 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.440 |
| EEB83560.1 | citE | RGAI101_709 | RGAI101_3576 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | [G] COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.781 |
| EEB83560.1 | ibd | RGAI101_709 | RGAI101_1991 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | [I] COG1960 Acyl-CoA dehydrogenases. | 0.559 |
| EEB83560.1 | mclA | RGAI101_709 | RGAI101_1804 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | [G] COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.781 |
| EEB83560.1 | sucC | RGAI101_709 | RGAI101_3113 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.837 |
| EEB83560.1 | sucD | RGAI101_709 | RGAI101_1546 | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | succinyl-CoA synthase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.837 |
| EEB85087.1 | EEB83201.1 | RGAI101_2237 | RGAI101_348 | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase. | [I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). | 0.594 |
| EEB85087.1 | EEB83560.1 | RGAI101_2237 | RGAI101_709 | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase. | [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | 0.899 |
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