Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB83092.1Trap dicarboxylate transporter - dctp subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (364 aa)    
Predicted Functional Partners:
EEB85205.1
Mannitol transporter; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
 
  0.986
EEB86295.1
Mannitol transporter; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
    0.888
EEB82468.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [Q] COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.754
EEB82615.1
Trap dicarboxylate transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
    0.729
EEB85056.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
     0.722
EEB83567.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
    0.702
EEB82508.1
Trap dicarboxylate transporter- dctp subunit; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
  
 
0.574
EEB84037.1
Trap dicarboxylate transporter, dctp subunit; [Q] COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
     
 0.527
EEB84184.1
Bacterial extracellular solute-binding protein, family 7; [Q] COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
     
  0.527
EEB84425.1
Trap dicarboxylate transporter- dctp subunit, putative; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
     
 0.527
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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