STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB85296.1ABC transporter, ATP-binding. (199 aa)    
Predicted Functional Partners:
EEB83185.1
Surface presentation of antigens protein.
 
 
 0.997
fliI
[C] COG0056 F0F1-type ATP synthase, alpha subunit.
 
 
 0.997
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.989
EEB84621.1
[S] COG3334 Uncharacterized conserved protein.
 
    0.988
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
 
 0.986
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.985
EEB84632.1
Flagellar M-ring protein FliF, putative; [NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
 
  
 0.984
fliE
[NU] COG1677 Flagellar hook-basal body protein.
 
  
 0.981
EEB86538.1
Conserved hypothetical protein.
 
    0.979
flgB
[N] COG1815 Flagellar basal body protein.
 
  
 0.978
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.