Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEB83119.1[EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (384 aa)    
Predicted Functional Partners:
EEB83614.1
[EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.976
EEB85180.1
Extracellular solute-binding protein, family 5; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  0.964
EEB86430.1
ABC transporter, nucleotide binding/ATPase protein (oligopeptide); [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  0.952
EEB82770.1
[EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.892
EEB85522.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.862
EEB82869.1
Oligopeptide ABC transporter, ATP-binding protein; [R] COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.
 
  0.850
EEB85669.1
Cyclic nucleotide-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
  
  0.849
EEB82873.1
ABC transporter, membrane spanning protein (oligopeptide); [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.838
EEB83562.1
[EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.828
EEB82731.1
Oligopeptide ABC transporter, ATP-binding protein; [E] COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.810
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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