STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB85586.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
EEB85974.1
Hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold.
     0.991
EEB85401.1
Ornithine cyclodeaminase/mu-crystallin family protein; [E] COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog.
 
  
  0.736
EEB83015.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; [R] COG1011 Predicted hydrolase (HAD superfamily).
  
 
 0.726
EEB83808.1
Non-ribosomal peptide synthetase, putative; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
 0.694
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 0.678
EEB85756.1
YaiI/YqxD family protein; [S] COG1671 Uncharacterized protein conserved in bacteria; Belongs to the UPF0178 family.
       0.626
EEB83154.1
[E] COG4583 Sarcosine oxidase gamma subunit.
  
     0.507
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
  0.504
EEB83560.1
[I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 
  0.491
EEB85236.1
Dehydrogenase/transketolase family protein; [C] COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
    
 0.476
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.