STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fpr[C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (282 aa)    
Predicted Functional Partners:
cysI
Sulfite reductase; [C] COG1251 NAD(P)H-nitrite reductase.
 
  
 0.765
EEB84385.1
[S] COG3749 Uncharacterized protein conserved in bacteria.
 
     0.697
boxB
benzoyl-CoA oxygenase, B subunit; [S] COG3396 Uncharacterized conserved protein.
  
 0.657
cysH
Phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
       0.634
EEB86187.1
Conserved hypothetical protein.
       0.634
fadH
2,4-dienoyl-CoA reductase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.549
cysG_2
Siroheme synthase; [H] COG2875 Precorrin-4 methylase; overlaps another CDS with the same product name.
       0.521
cysG_1
Siroheme synthase; [H] COG2875 Precorrin-4 methylase; overlaps another CDS with the same product name.
       0.521
paaN
Phenylacetic acid degradation protein paaN; [C] COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
 0.518
EEB84114.1
Sarcosine oxidase, alpha subunit family; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 
 0.511
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.