STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB86053.1Bacterial transferase hexapeptide repeat protein; [E] COG1045 Serine acetyltransferase. (186 aa)    
Predicted Functional Partners:
EEB83353.1
Transferase hexapeptide repeat protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.822
EEB83013.1
Acetyltransferase with hexapeptide repeat, putative; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.770
EEB85584.1
[R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.767
EEB85008.1
Acetyltransferase; [E] COG2171 Tetrahydrodipicolinate N-succinyltransferase.
 
     0.745
EEB83065.1
Hypothetical protein.
  
    0.715
EEB86494.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
  
    0.684
EEB85798.1
Acetyltransferase; [E] COG1045 Serine acetyltransferase.
 
  
  0.656
EEB84288.1
Glycosyl transferase, group 1 family; [M] COG0438 Glycosyltransferase.
 
    0.641
EEB83891.1
Phosphonate metabolism protein, transferase hexapeptide repeat family; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.609
EEB84682.1
[R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.591
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.