STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEB86053.1Bacterial transferase hexapeptide repeat protein; [E] COG1045 Serine acetyltransferase. (186 aa)    
Predicted Functional Partners:
EEB83353.1
Transferase hexapeptide repeat protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.818
EEB83013.1
Acetyltransferase with hexapeptide repeat, putative; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.769
EEB85584.1
[R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.766
EEB85008.1
Acetyltransferase; [E] COG2171 Tetrahydrodipicolinate N-succinyltransferase.
 
     0.744
EEB83065.1
Hypothetical protein.
  
    0.717
EEB86494.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
  
    0.686
EEB84288.1
Glycosyl transferase, group 1 family; [M] COG0438 Glycosyltransferase.
 
    0.644
EEB83891.1
Phosphonate metabolism protein, transferase hexapeptide repeat family; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.607
EEB85798.1
Acetyltransferase; [E] COG1045 Serine acetyltransferase.
 
     0.594
EEB84682.1
[R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.593
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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