STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB86106.1Trap dicarboxylate transporter- dctp subunit; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (338 aa)    
Predicted Functional Partners:
EEB84289.1
[G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
  0.938
EEB86460.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
     0.891
EEB84987.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.620
EEB82985.1
Bacterial extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.585
EEB83887.1
Hypothetical protein.
  
 
  0.578
EEB83073.1
Trap dicarboxylate transporter- dctp subunit; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
     
 0.527
EEB83092.1
Trap dicarboxylate transporter - dctp subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
     
 0.527
EEB85799.1
Twin-arginine translocation pathway signal; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
     
 0.527
EEB82557.1
Twin-arginine translocation pathway signal; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
     
 0.527
EEB85271.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [Q] COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
 
  0.525
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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